Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833779.1_cds_XP_016505399.1_18743
CDS Infomation

[gene=LOC107823285] [db_xref=GeneID:107823285] [protein=endoglucanase 1-like] [protein_id=XP_016505399.1] [location=join(33258..33488,33586..33996,34086..34178,34396..34557,34645..34756,35058..35548)] [gbkey=CDS]
Sequence

ATGGCTCATTTTATTGGGGCTTCTTTAAACATGCTGATTTTATGCTTCACCTTCTTCCTC
TTACTTAACCTTTCTCATAATTTTGCCTTTGCTTTCACTTCTCAAGATTACTCTAATGCT
CTTGAGAAATCAATTCTCTTTTTCGAGGGACAGAGGTCTGGAAAGTTGCCTGCAAATCAA
CGCCTTAATTGGAGGGGTGATTCTGGCTTATCCGATGGTTCCGGTTACCATGTTGACCTA
GTAGGAGGATATTATGATGCAGGGGACAATATTAAGTTTGGGCTGCCAATGGCATTCACA
ACAACTCTACTAGCTTGGAGTGTAATCGAATTTGGAAGTTCCATGCACAACCAACTTGTC
AATGCTAAAGAAGCGATTCGTTGGAGTACTGATTATCTTCTTAAAGCAGCTACAGCGAGC
CCCAACACGCTATACGTGCAAGTAGGAGATCCAAATGAAGATCACAAGTGTTGGGAAAGA
CCTGAGGATATGGACACACCGCGCAATGTGTACAAAGTGTCGCCACAGAATCCAGGTTCT
GATGTTGCAGCTGAAACTGCTGCTGCTTTGGCTGCTGCCTCTATTGTGTTCAAAGATTCT
GATCCTTCTTATTCCTCTAAATTACTGCATACTGCACAAGAGGTGTTTGATTTTGCGGAC
AGGTATAGAGGTTCATATAGTGACAGTCTCAGTTCAGTGGTCTGCCCATTTTACTGCTCT
TACTCTGGATACCATGATGAACTTTTGTGGGGAGCATCATGGCTTCATAGAGCTTCGCAA
GATGCTTCTTATCTTGCTTATATCCAATCAAATGGCCAAACTTTGGGTGCTACTGAAGAT
GATTATTCCTTCAGTTGGGATGACAAGAGACCTGGAACCAAAATTGTTCTCTCAAAGGAC
TTCTTGGAAAAGAGTACTCAAGAATTCCAAGCATACAAAGTTCACTCAGACAACTATATC
TGCTCTTTAATTCCAGGCTCACCTAGCTTTCAAGCTCAGTATACCCCAGGGGGGCTTCTA
TTTAAAGGAAGTGCAAGCAATCTCCAATACGTAACATCCTCATCATTTCTTCTAATAACC
TATGCCAAATACTTGAAGTCAAATGGAGGAGCTGTCTCATGTGGAGCTTCAAGATATCCT
GCAGAGAAGCTCGTTGAACTCGCAAAAAAACAAGTAGACTACATATTAGGAGATAATCCA
GCAAGAATATCGTACATGGTTGGTTTCGGACAGAGGTATCCGCTACGTGTGCACCATAGA
GGTTCATCTCTACCATCAGTGCACGCACATCCCGGTCACATTGGCTGCAACGAGGGATTC
CAGTCTATGAACTCGGGCTCGCCTAATCCAAACGTTCTTGTTGGAGCCATTGTGGGTGGT
CCAGACAGTAAAGATAACTTCGAAGATGACAGGAATAATTATCAGCAATCAGAGCCTGCT
ACATACATTAATGCACCACTAGTTGGAGCTCTTGCTTTCTTATCTGCAAAATCTATCTAA

Peptide Sequence

PEP ID

XP_016505399.1
PEP Infomation

PREDICTED: endoglucanase 1-like [Nicotiana tabacum]
Sequence

MAHFIGASLNMLILCFTFFLLLNLSHNFAFAFTSQDYSNALEKSILFFEGQRSGKLPANQ
RLNWRGDSGLSDGSGYHVDLVGGYYDAGDNIKFGLPMAFTTTLLAWSVIEFGSSMHNQLV
NAKEAIRWSTDYLLKAATASPNTLYVQVGDPNEDHKCWERPEDMDTPRNVYKVSPQNPGS
DVAAETAAALAAASIVFKDSDPSYSSKLLHTAQEVFDFADRYRGSYSDSLSSVVCPFYCS
YSGYHDELLWGASWLHRASQDASYLAYIQSNGQTLGATEDDYSFSWDDKRPGTKIVLSKD
FLEKSTQEFQAYKVHSDNYICSLIPGSPSFQAQYTPGGLLFKGSASNLQYVTSSSFLLIT
YAKYLKSNGGAVSCGASRYPAEKLVELAKKQVDYILGDNPARISYMVGFGQRYPLRVHHR
GSSLPSVHAHPGHIGCNEGFQSMNSGSPNPNVLVGAIVGGPDSKDNFEDDRNNYQQSEPA
TYINAPLVGALAFLSAKSI

Transcript Sequence

Gene sequence data has not been registered.